BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H11LP1|AL427837
(695 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1639 1296 0.0
>3x_Contig1639
Length = 14140
Score = 1296 bits (647), Expect = 0.0
Identities = 676/693 (97%)
Strand = Plus / Plus
Query: 1 gatcttgcagtagctcgaccattctagagaggagttgaaggttgcaaacacgacgtatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4372 gatcttgcagtagctcgaccattctagagaggagttgaaggttgcaaacacgacgtatgc 4431
Query: 61 acgttcactagatagttcgagatacaggagacatctagttagacccttttctaccattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 acgttcactagatagttcgagatacaggagacatctagttagacccttttctaccattga 4491
Query: 121 atcattgatgatactaggagtyattttaggtaaaatagaagaaacaataatctgatcatg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 atcattgatgatactaggagtcattttaggtaaaatagaagaaacaataatctgatcatg 4551
Query: 181 tgacccattgattggctttgtctttgtttccaccctccatcttgttatgacatccggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552 tgacccattgattggctttgtctttgtttccaccctccatcttgttatgacatccggatg 4611
Query: 241 atgataagcaccggttcgatacacaaaaagatttccttacactgttagaaaggcttcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4612 atgataagcaccggttcgatacacaaaaagatttccttacactgttagaaaggcttcatc 4671
Query: 301 tatacctgaataatttattactcatatttgaatctcgctatttacgtaagtagatacgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4672 tatacctgaataatttattactcatatttgaatctcgctatttacgtaagtagatacgat 4731
Query: 361 taataaagttgacatttctctttctggttcaagcttccttgaaacttctcggtattaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4732 taataaagttgacatttctctttctggttcaagcttccttgaaacttctcggtattaatt 4791
Query: 421 taataatgtaagcgtttctgttaatttcaccacttttcttcactttagtaagcgctattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4792 taataatgtaagcgtttctgttaatttcaccacttttcttcactttagtaagcgctattg 4851
Query: 481 tcagtttttactaagatgaataatgcctaaaaaaaaaaaaatcaaaaaaaaaaaaaccgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4852 tcagtttttactaagatgaataatgcctaaaaaaaaaaaaatcaaaaaaaaaaaaaccgc 4911
Query: 541 gcgaaacgacagacaacacgaacackgkgtckkaakggkkctgaggwaagtcagggcggg 600
|||||||||||||||||||||||| | ||| || | |||||| |||||||| |||
Sbjct: 4912 tcgaaacgacagacaacacgaacactgtgtcttaatgtttctgaggaaagtcaggtcggt 4971
Query: 601 ggttagwagttccccaaggtgcaagacaatctgggattacggggttggataagccattgt 660
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4972 ggttagaagtaccccaaggtgcaagacaatctgggattacggggttggataagccattgt 5031
Query: 661 aatagacttatctatagttactcctwgtgtaaa 693
|||||||| |||||||||||||||| |||||||
Sbjct: 5032 aatagactgatctatagttactcctagtgtaaa 5064
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,981
Number of Sequences: 1807
Number of extensions: 17981
Number of successful extensions: 2698
Number of sequences better than 1.0e-20: 1
length of query: 695
length of database: 10,358,551
effective HSP length: 16
effective length of query: 679
effective length of database: 10,329,639
effective search space: 7013824881
effective search space used: 7013824881
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)